Insertion junction: CLIP2.056438_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056438
Chromosome:chromosome 13
Location:4590690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603550 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCATGGCGACCAGCCTAGTCCACGGCTCGGGTCTGTCAGCATCTCGCA
Internal bar code:TTAACGCCGAGTATTACTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:657
LEAP-Seq percent confirming:36.5385
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGGACATATGGATTGGA
Suggested primer 2:TGAGGGAAGGACGGAGGTAG