Insertion junction: CLIP2.056439_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056439
Chromosome:chromosome 10
Location:3865953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446200 (1 of 1) PF11566 - PI31 proteasome regulator N-terminal (PI31_Prot_N) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAACTTAACATCTCAGCTACTAGCCATAGTCTCAGCTCCCGACCGAAA
Internal bar code:TGCGTGAATAGTTAGAACCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1705
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCTGGCTCACAAACAAC
Suggested primer 2:CCGGCACTATCCTAGCACTG