Insertion junction: CLIP2.056440_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056440
Chromosome:plastome
Location:18856
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802270 petB,ChreCp008,2717017 cytochrome b6; (1 of 1) K02635 - cytochrome b6 (petB) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGCAACTTTAACACGTTTCTACAGTTTACACACTTTCGTATTACCAC
Internal bar code:TTCTGGCTTGGGGCCTCAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:129
LEAP-Seq percent confirming:15.7895
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTTCCATCACGAAGGCT
Suggested primer 2:CCCCTTCGGGCAACTAAAGT