Insertion junction: CLIP2.056451_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056451
Chromosome:chromosome 7
Location:4879005
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346400 FKM6 DNA methylase in the FkbM family; (1 of 3) K05302 - SET domain-containing protein 6 (SETD6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGCGAGCAGGCGCGTGGGGAAATAAAGAGGCCGCCGCCGTGTGTGC
Internal bar code:GTTCTCCGTCGTCAACCTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1237
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCGAGCGACGAAAAGAG
Suggested primer 2:GCGACTGGACAAGGTGGTTA