Insertion junction: CLIP2.056454_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056454
Chromosome:plastome
Location:28921
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802278 2717059,rpl5,ChreCp016 50S ribosomal protein L5; (1 of 2) PF00673 - ribosomal L5P family C-terminus (Ribosomal_L5_C) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGTTTTAGTATATAAATTTTTTAAACGTTGTGTCATATTAAAAAAAAA
Internal bar code:ACGGGGTGAGGGGAACTGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:355
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTTCGGGCAAGTAAACT
Suggested primer 2:GCCACTGACGTCCACTACAA