Insertion junction: CLIP2.056463_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056463
Chromosome:chromosome 16
Location:3909947
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689250 GTR23 (1 of 1) PF04564//PF06701 - U-box domain (U-box) // Mib_herc2 (MIB_HERC2); Putative ubiquitin-protein ligase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGCTTCTTCTCGAAAGCCCGGTTGAAAATGTCGAGCTTACGTTGCC
Internal bar code:ACGGGACCGTCAACATCATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3620
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTATACGGTCTTCCCACG
Suggested primer 2:CTGAAGCTGGGGTGTTGCTA