Insertion junction: CLIP2.056466_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056466
Chromosome:chromosome 12
Location:9183915
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543301 CSV11 Chlamydomonas-specific family protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCACCGGTGAAAAGCTGATGGCACTCGCTGTGCTCGCTCTGCTCAGC
Internal bar code:CGTAGAAGAGCCTGTCCCTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1174
LEAP-Seq percent confirming:51.6129
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGACACAAGGCGACCTG
Suggested primer 2:CTGGGCATTCAGGAATGGGT