Insertion junction: CLIP2.056471_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056471
Chromosome:chromosome 16
Location:6942605
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671825 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAGATGTGGCTACGAAGTTGCGGGAGGGATGCTTCTGCTGAACCCCA
Internal bar code:GAATATACTATTTGCTTTCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1438
LEAP-Seq percent confirming:52.381
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AACGGCGGGTAAAAACAACG
Suggested primer 2:ATTTCCACAGCTCCCCTTCG