Insertion junction: CLIP2.056489_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056489
Chromosome:plastome
Location:127182
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802316 ChreCp052,2717043,ycf10,cemA (1 of 1) PTHR33650:SF2 - CHLOROPLAST ENVELOPE MEMBRANE PROTEIN; heme-binding protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGATATTTCTCTGCGTGAGGAAAAACCATTAACGCTTGTACAAGGTGT
Internal bar code:CTGCCACTGAGTGGTTACATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:222
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTAGCTGGCGATGAACGA
Suggested primer 2:TGCCCTATACCTACCGTGCA