Insertion junction: CLIP2.056490_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056490
Chromosome:chromosome 6
Location:8816576
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g311400 XPF1 (1 of 1) K10848 - DNA excision repair protein ERCC-4 (ERCC4, XPF); DNA repair enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGCGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Internal bar code:ATCCCTGCTACTTAGTTCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:320
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCCCCAGCGAATACTCC
Suggested primer 2:TATGCGAGCGACTGTACGTC