Insertion junction: CLIP2.056500_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056500
Chromosome:chromosome 5
Location:3585647
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGGTTGTATGGGACCCGGCCAAAAGGGGTTCGGACGCCCCAGCGCCT
Internal bar code:CCGCGGCTTAGGGGCCGAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1926
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTATTTTCGGGCACAGGG
Suggested primer 2:TGAGTGCCCAATGCTCAGAG