Insertion junction: CLIP2.056507_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056507
Chromosome:chromosome 3
Location:5274464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182400 (1 of 7) K18932 - palmitoyltransferase (ZDHHC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTAAGGATCACCCGACCACGTGGCTTCGAGCCTGCCCCGCCTGCCGT
Internal bar code:GCTTCTAACTTTTTGTGCCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:5015
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTAATGACCACACCCCCACC
Suggested primer 2:CCCAGATCGCAATGCACATG