Insertion junction: CLIP2.056508_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056508
Chromosome:chromosome 13
Location:2607016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580900 (1 of 1) K07178 - RIO kinase 1 (RIOK1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATATGCTCATTATTATTTTAGAAATGACGCCGTGAACTGCTGTGGGCCC
Internal bar code:TATCACGGCAACCTTGACCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1695
LEAP-Seq percent confirming:83.8095
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCAACACGCAAAGGATTT
Suggested primer 2:CAGGAACTCCTCAGCTGCAA