Insertion junction: CLIP2.056510_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056510
Chromosome:chromosome 17
Location:526783
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699350 SMM51 (1 of 13) PF12847 - Methyltransferase domain (Methyltransf_18); S-adenosyl-L-methionine-dependent methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAACCGTAGCTGTGTGCGTCATTAAGCCCGAAAAGTTATATTGCATGG
Internal bar code:CGTCCTCGAACTCATTAACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2038
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTTGACTGCCTGTACA
Suggested primer 2:GCACTTCATTGAGCTGCACC