Insertion junction: CLIP2.056513_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056513
Chromosome:chromosome 2
Location:6336010
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387700 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCGCCGCAACCGTCGGGCATAGAGGGCCTCGATGGACATAAGTCTGC
Internal bar code:CAGGTTCGATTGGGGAACGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1490
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCAGCCAAGCTTCTAGT
Suggested primer 2:GGTTGGGGAAGATCAAGGGG