Insertion junction: CLIP2.056518_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056518
Chromosome:chromosome 12
Location:5269771
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527918 (1 of 239) IPR016024 - Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCATTCACCGCTACACATGCTCTACCCATCCTCCAACAGGCCCTACC
Internal bar code:TACCTCCGAGCGACGCTGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1172
LEAP-Seq percent confirming:37.6812
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCGCTCTTACGTTGATTG
Suggested primer 2:CACTACGACCGGTGGAACAA