Insertion junction: CLIP2.056522_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056522
Chromosome:mitogenome
Location:955
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreMt.g802337 cob,801484,ChrepMp01 (1 of 1) K00412 - ubiquinol-cytochrome c reductase cytochrome b subunit (CYTB, petB); cytochrome b CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGACTAGAATGCTGAACACAAGAGCCAAGAACAAAGCACCGACCAAGT
Internal bar code:TGGCCGGCCATCTCGTTCAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:129
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGCTTTCAACCGTGTTG
Suggested primer 2:CTGTGGTGAAGTGTGCGTTG