Insertion junction: CLIP2.056523_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056523
Chromosome:chromosome 6
Location:4664657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278550 (1 of 3) PTHR12385//PTHR12385:SF44 - CTL TRANSPORTER // PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCGCAACGAAAAGAGGCCAGCGCACGTGTACTTGGAGGTTGGCACCT
Internal bar code:TAATCGGACTCGGCATATTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2294
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTGAGCGCTCTGTACGT
Suggested primer 2:AGGAGGATCAGCAGGCTGTA