Insertion junction: CLIP2.056523_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056523
Chromosome:chromosome 6
Location:4664663
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278550 (1 of 3) PTHR12385//PTHR12385:SF44 - CTL TRANSPORTER // PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTCCCTAAGGCAGCCACCTCCTTGTTGTTCCTAGTGACTTCTTTGGG
Internal bar code:TAATCGGACTCGGCATATTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2426
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGATCAGCAGGCTGTA
Suggested primer 2:TTGTTGAGCGCTCTGTACGT