Insertion junction: CLIP2.056536_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056536
Chromosome:chromosome 3
Location:5637406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186200 CDS1,PCT1 Phosphatidate cytidylyltransferase; (1 of 1) PTHR13773:SF8 - PHOSPHATIDATE CYTIDYLYLTRANSFERASE, PHOTORECEPTOR-SPECIFIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGTCAAAACAAGGAATGCATAGCTAAGTTTGCACTTAATGAGCCACG
Internal bar code:GAATCACGTATTACATCGATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2788
LEAP-Seq percent confirming:95.7576
LEAP-Seq n confirming:158
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:165

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCATGGCTAACGACTAT
Suggested primer 2:ATGTAGGCGATGCGGAAGAG