Insertion junction: CLIP2.056537_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056537
Chromosome:chromosome 11
Location:736305
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467627 (1 of 1) 1.14.13.134 - Beta-amyrin 11-oxidase / CYP88D6 3'UTR
Cre11.g467628 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATGGCCCACAAGAACTAACACCTCTATGGGTCCGTCCCTGACGCCTCG
Internal bar code:TATAAATCTTACCTTCATGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3348
LEAP-Seq percent confirming:82.1429
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCGTGTCAAGCTCACAGA
Suggested primer 2:CAAGAACTTGGTGGCGTGTG