Insertion junction: CLIP2.056538_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056538
Chromosome:chromosome 11
Location:1834019
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467450 SOM3 S-adenosyl-L-methionine-dependent O-methyltransferase; (1 of 4) PTHR13600//PTHR13600:SF12 - LEUCINE CARBOXYL METHYLTRANSFERASE // LEUCINE CARBOXYL METHYLTRANSFERASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGAATAGAGGGTAGAGCTAGCACGCATAGTGCTGACAAGGGGCGTAA
Internal bar code:GCGGTGTTACAGTGGTTCATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1917
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGTGATTTCGTCGTGCG
Suggested primer 2:GTGGAAGAGGGGTGGTGATG