Insertion junction: CLIP2.056539_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056539
Chromosome:chromosome 14
Location:2638036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g625400 RPT1 (1 of 1) K03061 - 26S proteasome regulatory subunit T1 (PSMC2, RPT1); 26S proteasome regulatory subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCAACTAGCATTTCTCTTGACCACTGCTTCTTTCCTGGACGAGTGAG
Internal bar code:AGAGATGGCGGTTTAAATCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:916
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCACAATGCTTTGCTGC
Suggested primer 2:AGCCGATCGCAAAACCAGTA