Insertion junction: CLIP2.056544_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056544
Chromosome:chromosome 2
Location:7068459
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389986 (1 of 17) IPR029069 - HotDog domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACAGGTGAAGGTGCTTGTTCTTTGCTGGCGAGCATAGCATGGCACGG
Internal bar code:ATACATAGACTACCTGTCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4061
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTCAGGATGCAGAGCTG
Suggested primer 2:GGGCACTAAAAGGGCTGCTA