Insertion junction: CLIP2.056550_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056550
Chromosome:chromosome 13
Location:1598291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573300 CDD4 (1 of 1) K11991 - tRNA(adenine34) deaminase [EC:3.5.4.33] (tadA); Cytosine deaminase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGATGGTGCGCGTGCCGCATGGCCGTGTCTAGAAAGTTGCATGGGCAAC
Internal bar code:GCGCAACCGCGATTTACAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2293
LEAP-Seq percent confirming:97.1831
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TTAACGAAGTCGGGGTTGGG
Suggested primer 2:ACATTTGCGTGTTCAACCCG