Insertion junction: CLIP2.056559_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056559
Chromosome:chromosome 3
Location:6808494
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197200 5'UTR
Cre03.g197250 (1 of 1) PTHR13948//PTHR13948:SF25 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTATATATTGGCAAACCTACATGCATGCATGCTGGATCGCCTTTACAG
Internal bar code:TGTGGGTGTCGGCGGGAAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1225
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTTGAAGATGTCGGGTC
Suggested primer 2:CAATGAGAGGCTCCCAGCAA