Insertion junction: CLIP2.056560_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056560
Chromosome:chromosome 6
Location:2817142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271900 (1 of 1) 1.1.99.37 - Methanol dehydrogenase (nicotinoprotein) / Nicotinoprotein methanol dehydrogenase 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGCCATCGCAGACGCGCGCCGCTCGGGCGGCTTCTGCGGCAGCATGC
Internal bar code:GTTTCAATGCGCAGTTTAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:969
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGCGTGCGCTAGTTACC
Suggested primer 2:CAGCCATCAACCCCTCACAT