Insertion junction: CLIP2.056562_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056562
Chromosome:chromosome 16
Location:7932754
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690431 (1 of 1) 1.3.99.34 - Transferred entry: 1.3.7.11 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCGTTGCAGTGCGAGCCGCCTTCATGTATATTGGCCAGTTGCGTGAG
Internal bar code:CCGTTGGAGAAACTCGCCCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:796
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGCCAAACAAGTGTCG
Suggested primer 2:ACAACTACCAGATGCTGCCC