Insertion junction: CLIP2.056566_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056566
Chromosome:chromosome 9
Location:2396443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393800 3'UTR
Cre09.g393850 MAPKKK2,PTK28,MAPKKK2 Mitogen-Activated Protein Kinase Kinase Kinase; (1 of 1) IPR000719//IPR001229//IPR001245//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Jacalin-like lectin domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATTGTACGCAAACGAACATGGCGCCACCGAGGGCCCACGGACGTACAA
Internal bar code:TATGGCCATGTAAGGCGCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4694
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCTAGGGGTGCCGTATC
Suggested primer 2:GATTGTGTGTGGGGAGGGAG