Insertion junction: CLIP2.056571_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056571
Chromosome:chromosome 2
Location:1191218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081400 BCA1 Branched chain amino acid aminotransferase; (1 of 1) 2.6.1.88 - Methionine transaminase / Methionine-oxo-acid transaminase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCATAAACAAAACAACACTTGTCCCAGCATAGCCAGTCACTTCATACG
Internal bar code:GGGGGTCCGAGTGGGGTTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1182
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCCGCAATCAAGGTCGTT
Suggested primer 2:AAACGCGTGAAACAGCTGTC