Insertion junction: CLIP2.056582_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056582
Chromosome:chromosome 12
Location:9377220
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541600 3'UTR
Cre12.g541650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTGCGCAGAGTTTCCGGAGGCACCTTGGGACCAGCTCACTTAGTTCG
Internal bar code:CCAACTTGGCAACGTGAGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2178
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACGTGTGGAGGCAGAAA
Suggested primer 2:TTGGCAAAAGCTTTACCCGC