Insertion cassette: | CIB2 |
Side of cassette: | 5' |
Strand: | - |
Strain: | CLIP2.056584 |
Chromosome: | chromosome 8 |
Location: | 3036160 |
Confidence (%): | 80 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
Cre08.g375150 | (1 of 1) PF11904//PF12796 - GPCR-chaperone (GPCR_chapero_1) // Ankyrin repeats (3 copies) (Ank_2) | 5'UTR | |
Cre08.g375200 | (1 of 1) K07870 - Ras homolog gene family, member T1 (RHOT1, ARHT1) | 5'UTR |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | AAGCTTCGGTGCAAGTTGCCCTGTTGGTGTTGTTACAAGCCGCAAATTCT |
Internal bar code: | GAGCTGGGTGTTAATTGACCTG |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 1513 |
LEAP-Seq percent confirming: | 27.5862 |
LEAP-Seq n confirming: | 8 |
LEAP-Seq n nonconfirming: | 21 |
LEAP-Seq n unique pos: | 29 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | TGGTGGACAGAGGTCAAGGA |
Suggested primer 2: | TGGGGATGTCGGTGTTAAGC |