Insertion junction: CLIP2.056599_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056599
Chromosome:chromosome 2
Location:5182900
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g112050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCGTGCCAGACGCCCCCTGCCACCAATCAAGCCAGTGCCAGTGCCGTG
Internal bar code:CGTCAAAAATGGTCCGTAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:57
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCAGTTTCTCTGACGTGA
Suggested primer 2:AGAACAAAGTTCGCAACCGC