Insertion junction: CLIP2.056600_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056600
Chromosome:chromosome 14
Location:3710632
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g631400 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTGGTGACGGGCTGGGAGGTGCGGGGCTGGGAGGTGCGGGGCTGGGA
Internal bar code:GGGCGGACCGTGGGACTGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:78
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCATGCTACATCACGCAC
Suggested primer 2:GGGGCTTAGGAGATGGAGGA