Insertion junction: CLIP2.056606_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056606
Chromosome:chromosome 2
Location:7951909
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145300 (1 of 1) K15544 - RNA polymerase II subunit A C-terminal domain phosphatase SSU72 (SSU72) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAAGTGCCATAATGGATGAGGAGGTGGAGTGATGTATGCAGGCATAA
Internal bar code:GTCTGTCGGATTCCCAGATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1914
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCAGGTTGCTGGATGGTG
Suggested primer 2:ATGGTGGGTTGGGTATGCAG