Insertion junction: CLIP2.056615_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056615
Chromosome:chromosome 7
Location:2112896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g326350 (1 of 54) IPR001680//IPR017986 - WD40 repeat // WD40-repeat-containing domain intron
Cre07.g326400 (1 of 1) PTHR21236:SF1 - PROTEIN YIPF6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTAGCATTCCTTGCATGCTTCCCGACGGGCATGCGTGTCAGAGCTACC
Internal bar code:CTACGTTTCGGCTGCTGCCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4897
LEAP-Seq percent confirming:98.5714
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CAAATATGTGCGGCGGGAAG
Suggested primer 2:ATTTCCTCCCTCCCTCTCCC