Insertion junction: CLIP2.056629_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056629
Chromosome:chromosome 9
Location:3406122
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g395732 (1 of 5) IPR000104//IPR001623 - Antifreeze protein, type I // DnaJ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAAGGCATACTGGTCGCACATAGGTCCTGCGCCGTGGCGGTGGCGATG
Internal bar code:TTATATTACTCCATAGTTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1821
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGGCAAGAAACATGGC
Suggested primer 2:TTGAGGCGCTCCAAGAAGAG