Insertion junction: CLIP2.056630_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056630
Chromosome:chromosome 6
Location:5100744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g282700 (1 of 1) PTHR24414//PTHR24414:SF29 - FAMILY NOT NAMED // SEGMENTATION PROTEIN CAP'N'COLLAR 5'UTR
Cre06.g282750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCTGAGTTTCCACGGCCCTGTGACAACTGGGCATATCTTCGTCGTTT
Internal bar code:TTTTATCGGGGATAAGCAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4006
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACCAAGCATGCATACTG
Suggested primer 2:TGTTGTTGGATTTGCTGCGG