Insertion junction: CLIP2.056643_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056643
Chromosome:chromosome 8
Location:2513792
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372600 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCTCAAACACCTCCGTATTCACGTATACTCATATACACAACTCCAAC
Internal bar code:AACTGGTACTCTTGCCGTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4842
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCATTGGCGACATCTGCT
Suggested primer 2:TGAGGAGAGTGAGTGGGAGG