Insertion junction: CLIP2.056644_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056644
Chromosome:chromosome 8
Location:1572026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365450 (1 of 17) IPR001305 - Heat shock protein DnaJ, cysteine-rich domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGACTACGTAGAGCCAGTGCTGTGATGTGCTACGACGCATGGGCTGG
Internal bar code:GAGGTTCCAAGTAGTGGGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:901
LEAP-Seq percent confirming:4.85437
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:98
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:GGGACCATCAGTGAAGCCAA
Suggested primer 2:TCACCATTAGGACGCACCAC