Insertion junction: CLIP2.056646_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056646
Chromosome:chromosome 3
Location:6009375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189650 (1 of 1) K04498 - E1A/CREB-binding protein (EP300, CREBBP, KAT3); Histone acetyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCGCATCATCCAATACCAGTGCACGGCGCGGGTTGCGCGTCGTTGGT
Internal bar code:TGACTATCTGGATATAATGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2079
LEAP-Seq percent confirming:90.1961
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGAGTTGCAGTGTGACT
Suggested primer 2:ATTAGGCGGCGGATGATGAG