Insertion junction: CLIP2.056646_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056646
Chromosome:chromosome 3
Location:6009378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189650 (1 of 1) K04498 - E1A/CREB-binding protein (EP300, CREBBP, KAT3); Histone acetyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGTTTATGCACCGGCCCGTTCGATGAACGTGACTAGACATGTTCAAA
Internal bar code:CAATGGTTCGTTTGTTGTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2376
LEAP-Seq percent confirming:90.3614
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:ATTAGGCGGCGGATGATGAG
Suggested primer 2:CTCGGAGTTGCAGTGTGACT