Insertion junction: CLIP2.056649_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056649
Chromosome:chromosome 17
Location:1142394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704150 GDPD5,GDP5 Glycerophosphoryl diester phosphodiesterase family protein; (1 of 5) PTHR23344//PTHR23344:SF7 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAAAACTGCATGTGCGCCATAATATCACAGCTAAACCCAGCTAAGCCC
Internal bar code:GTATGTCCAGTCACATAGTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1859
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCATCTGAATCGCAGTGC
Suggested primer 2:GTAGACGCGTAGTGGAGAGC