Insertion junction: CLIP2.056652_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056652
Chromosome:chromosome 5
Location:1125592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248250 (1 of 1) 1.4.1.24 - 3-dehydroquinate synthase II / DHQ synthase II 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTATCTTCCCCGAATCCGAAACGCATGGGCGTATACGAGAGTTTGGAT
Internal bar code:GATGTAGGGTGGAAATCAAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:880
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCTTTCATCGACAGCTT
Suggested primer 2:TCGCTTTTGTGCTCACTTGC