Insertion junction: CLIP2.056654_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056654
Chromosome:chromosome 12
Location:756535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g492550 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGGCTTCGCCCCCCCTGGATCGCTTCGCTCAGGGGGCTCAGCCCAA
Internal bar code:TGAATTCCGGATGTTTATCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1385
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGTTGGGCAGGCTCTTA
Suggested primer 2:CTGGGGCCCGGATGATTATC