Insertion junction: CLIP2.056661_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056661
Chromosome:chromosome 13
Location:4454648
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g602650 (1 of 1) PTHR12231//PTHR12231:SF150 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTAGCGGATCTGGCCTGCTGGTTGGAGGCACCGCATTTGCTAACAGC
Internal bar code:TCCCACCCGACACCCCGAAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1054
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCCACCTCATCATCAAC
Suggested primer 2:CAAGGGAAAGCGTGTGTGTG