Insertion junction: CLIP2.056662_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056662
Chromosome:chromosome 7
Location:3266080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334300 TRP6 Transient receptor potential ion channel protein; (1 of 2) PTHR22847//PTHR22847:SF442 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED 3'UTR
Cre07.g334350 (1 of 3) 2.7.1.39 - Homoserine kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCATGGTACTGTGGTCCGACCGGAAAGGCCAGTGGCAGGCAACCCA
Internal bar code:GGGGCAGTCATCTTCTAGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2136
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGAGCAGAGTTGGGAAGT
Suggested primer 2:CAGGCGCGAGATTAAACTGC