Insertion junction: CLIP2.056665_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056665
Chromosome:chromosome 2
Location:5409899
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g113752 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGTATGTGCGCATGTGCGTGTGTGTGTGTTGTGCAGGTCGTGCAGC
Internal bar code:CATCGATCTGGTTTGTCCCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:326
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACCTCCTG
Suggested primer 2:CAAACAGCTGGCACTTCCAC