Insertion junction: CLIP2.056667_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056667
Chromosome:chromosome 16
Location:6251517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676400 HEL63 (1 of 1) K12811 - ATP-dependent RNA helicase DDX46/PRP5 (DDX46, PRP5); DEAD/DEAH box helicase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTGCCAGTCCCGCATGGGCCCTGCTTCTGTATTGCTACAGTTCATTTG
Internal bar code:TTTAATGCACATTACATAATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1779
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCACGGTCGTGGTCTTTC
Suggested primer 2:GGCGCAATAGTTCAGGGTCT