Insertion junction: CLIP2.056667_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056667
Chromosome:chromosome 16
Location:6251521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676400 HEL63 (1 of 1) K12811 - ATP-dependent RNA helicase DDX46/PRP5 (DDX46, PRP5); DEAD/DEAH box helicase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCATGACAAGCTGCCCTTTCCACAATTTCTATGCAAATATATTATCT
Internal bar code:TTGTCCCGATTGAGTCCGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:983
LEAP-Seq percent confirming:95.9184
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCAATAGTTCAGGGTCT
Suggested primer 2:AGTCACGGTCGTGGTCTTTC